Chemical Potential   µ  and Homeostasis

2013. Riga Stradin’s University BioChemicalPprocesE.doc

Chemical potential show, how much change of free energy GA brings into system-reaction adding of
1 mole amount of compound A . In a fact: how great amount of free energy belongs to one 1 mol in mixture.

It means how much free energy GA has itself per 1 mole compound A , if amount of compound in molar numbers
is nA = 1 mole : µA =  = A + R•T•ln(XA)                                                   (1-1)

chemical potential of compound A, where: A, kJ/mol - standard chemical potential at standard conditions
T = 298.16 K , pressure p = 101.3 kPa; R = 8.3144 J/mol/K - universal gas constant;
ln(XA) - natural logarithmic function from argument XA and XA, unless - molar fraction concentration of
compound A, expressed as XA = nA/ntotal and laying between 0<XA1 (absence and pure) compound A
concentrations, where  nA, mol - number of moles for compound A and ntotal , mol - total number of moles
all present compounds total including water. Logarithmic function properties ln(1) = 0 yield that standard
chemical potential
A = µA at XA = 1 is pure A compound 1 mol free energy content A,
assuming standard free energy of formation A from elements for compound A per one 1 mole.

Reaction proceeds completely forward until end only when products of reaction have hardly little disposition
to reverse change back into reactants. In other words these products of reaction have trifling remarkable or
zero value of chemical potential: µproducts = 0 , affinity turns back to reactants: A <=x= products .

Thermodynamical conditions of chemical equilibrium.

             Provided chemical potential of reaction products is taking into consideration
(it has anything remarkable level of value ) , then reaction proceeds not completely until end, go not on completely
100% to reactants conversion to products, but one can observe the setting in equilibria.

In state of equilibria sum of chemical potentials for initial compounds is equal to sum of chemical potentials for
products – according chemical reaction equation reactants aA + bB and products cC + dD:

aA + bB cC + dD ;  aµA + bµB   =   cµC + dµD  (1-2)

     because compound factor-coefficients a, b, c, and d means multiply µ
    a times molecules A (A+A+A+…)= aA = amA and so on B, C, and D as
     seen on equation of reaction expression(1-2), takes  a part times b,c,d:

    (B+B+B+...)= bB = bµB; (C+C+C+…)= cC = cµC;

(D+D+D+…)=dD=dµD Chemical potencial µ like as amount of
   compound n in mols have additive properties, e.g. summing.

     The concentrations X of reactants and products at equilibrium define the equilibrium constant, Keq (see the Chemical Equilibrium). In the general reaction chemical potential sum for reactants µreactant and products µproduct at equilibrium are equal:(µreactant)= (µproduct) ; and standard free energy change Greaction = µproduct - µreactant  =0 for reaction is zero and expressed negative standard free energy change is

- reaction = R•T•ln   =  R•T•ln(Keq) ; Keq =  (1-3)

Kaksis 2011. Riga Stradin’s University http://aris.gusc.lv/BioThermodynamics/ChemicalPotential.doc
*Greaction = reaction + R•T•ln ≠0 ; 0 = reaction + R•T•ln(Keq) at equilibrium zero (1-4)

in Homeostasis(XDdXCc)/(XAaXBb)Keqdiffers from equilibrium constant Keq =  

We must be careful to distinguish between two 2 different quantities: the free-energy change, G, and the
standard free-energy change, . Each chemical reaction has a characteristic standard free-energy change per
one 1 mol of reactant, which maybe positive G°>0, negative G°<0, or some times zero G°=0, depending on
the equilibrium constant Keq of the reaction. The standard free-energy change tells us in which direction
and how far a given reaction must go to reach equilibrium when the  temperature is 25 °C or
To = 298.15 K, and the pressure p is 101.3 kPa (1 atm) and component concentrations at equilibrium are X.
Thus is a constant: it has a characteristic, unchanging value for a given reaction. But the actual free-energy
change G, is a function of reactant and product concentrations X and of the temperature T = 310.15 °K
prevailing during the reaction in human body, which will not necessarily match the standard conditions as
defined above. Moreover, the G of any reaction proceeding => spontaneously toward its equilibrium state is
always negative G<0, becomes less negative as the reverse <= reaction proceeds, and is zero G=0 at the point
of equilibrium (XDdXCc)/(XAaXBb) = Keq, indicating that no more work W = -G = 0 can be done by the
reaction: aA + bB = cC + dD according expression reaction + R•T•ln(Keq)=0 (1-4).
        Studies in „Medical chemistry”, „Biochemistry”. Studies of Gibs free energy changeΔGreac = ΔHreac T ·ΔSreac

ΔHreac
Enthalpy

ΔSreac
Entropy

T
Temperature

ΔGreac
Free energy

Spontaneous ability of reaction

Dispersed energy T·ΔSreac>0 is bound in surrounding and is lost as used free energy ΔGreac<0


ΔSreac>0 Positive entropy increases entropy change is positive


decomposition
reaction


AB =>A + B

Biochemical catabolism in living organisms consume the free energy in spontaneous reactions maintain organisms living.

1.
Endothermic
Positive
ΔHreac>0

 

low T own

ΔHreac>|-T·ΔSreac|

Positive ΔGreac>0

ΔHreac–T·ΔSreac>0

unfavorable reaction at low temperature

Dispersed energy is forming greater measure of chaos ΔSreac>0 Positive . Spontaneous catabolic reactions


high T p

ΔHreac<|-T·ΔSreac|


Negative
ΔG°reac< 0

ΔHreac–T·ΔSreac< 0


spontaneous
reaction at high temperature

 2.

Exothermic
Negative
ΔH
reac<0

consume free energy change ΔGreac<0 for life mantanance of organisms 37º C in human as well as to supply the heat for organisms as reaction Exothermic ΔHreac<0



low T
own

high T p



Negative
ΔGreac< 0

ΔHreac–T·ΔSreac> 0


spontaneous reaction
at any temperature




Living cell proliferations and existing conditions for Life




ΔS
reac<0 Negative entropy decreases entropy change is negative




synthesis
reaction




A + B
=>AB

Biochemical anabolism energy accumulates and organize in compounds as synthesized the higher order as well decreases measure of chaos
ΔS
reac<0 Negative

 3.
Endothermic

Positive ΔHreac>0

Synthesized as well as produced free energy ΔGreac>0 Positive accumulates

in photosynthesis, in ATP synthesis, in polypeptides as well as in proteins,




any T ownp



Positive ΔGreac>0

ΔHreacT·ΔSreac>0


unfavorable
reaction
thermodynamically forbidden at any temperature


4.
Exothermic

Negative ΔHreac<0

in synthesized molecules, living cells live and proliferates


high T
p
|ΔHreac|<|-T·ΔSreac


Positive ΔG
reac>0

ΔH
reacT·ΔSreac>0


unfavoable
rreaction at high temperature

low T own
|ΔHreac|>|-T·ΔSreac|

Negative ΔGreac<0 ΔHreacT·ΔSreac<0

spontaneous reaction at low temperature

In life important are negative change ΔSreac<0 of entropy and positive increase ΔGreac>0 of free energy!

Negative change ΔSreac<0 dispersed energy TΔS own decreases and into reaction accumulates supplied +Q energy into compound macroergic bonds as increase the free energy pΔGreac>0.

                                                                         ΔHreac=­ΔGreac+T·ΔSreac own .

Opposite to spontaneous reaction pΔGreac>0 negative change of free energy is lost energy.

A.Kaksis 2005. Riga Stradin’s University 4th page http://aris.gusc.lv/BioThermodynamics/BioThermodynamics.doc

Three Reaction examples studies of Homeostasis for students Medical (Bio)Chemistry :

1. Glucose and oxygen Green plants Photosynthes
red
and blue light photons energy
E=hν absorbtion
heat accumulates
in glucose substance

ΔH
reac>0  EndothermicΔHreac=+2805,27 kJ/mol

6 H3O++ 6 HCO3-+Q+ΔGreac=+2970 kJ/mol
Endoergic ΔGreac=+2970 kJ/mol

photosynthetic proces
ΔGreac>0 is
free
energy accumulates
in 1 mol cytosolic glucose molecules
C6H12
O6 biochemically „combusted” by oxygen O2
in mitochondria to combustion products
C
O2 and H2O
along oxidative phosphorilation pathway.

direct reaction



———————=>

reverse reaction
<=———————
       Plant Enzymes
<=---Photo synthetic
<=-Reaction
<=--- Center

           oxygen
C6H12O6
+ 6 O2
            + 6 H2O
Glucose
biochemical
combustion
Glycolysis,
Oxidative
Phosphorylation

The Membrane potential 3rd page http://aris.gusc.lv/BioThermodynamics/MembraneElektrodsAM.doc

(page 9 http://aris.gusc.lv/BioThermodynamics/OxRedBiologicalW.doc)

2. ATPase driven ATP synthesis (ATP adenosine tr

One mole of glucose C6H12O6 produces glycolytical, mitochondrial totally 36 ATP molecules. Membrane integral enzyme ATPase nano engine to accumulate free energy ΔGreac=+30.5 kJ/mol per produced ATP molecule under proton gradient drives in to reaction

                                                     ADP3- +H2PO4- 

iphosphate ATP4- anion pH=8.36)

[H+] 2290 → Proton gradient over 1 [H+]

————————————————→

[H+]=10-5 mol/Liter →[H+]=10-8.36 mol/L

TP.jpg

Ribosome Enzyme Complex Cofactor

←——————————————ATP4-

ATP4- +H2O

 own

 

For  free energy ΔGreac=+17.2 kJ/mol accumulation                   own

                  in Peptide Bond Formation Reaction is The Ribosomal protein synthesis: ala + gly®ala-gly+ H2O.

To store free energy ΔGreac=+17.2 kJ/mol per one mole of peptide bond.

Ribosome joint peptide syn

 Alanine    Ala [A]          

la.jpg

               +

ly.jpg

Glycine Gly [G]

thesis with ATP hydrolyze: free energy

ru.jpg

ATP hydrolyze is spontaneous
ΔG = -30.5kJ/mol and
total reaction sum is
ownspontaneous too
ΔG
reac =+17.2 + (- 30.5)= -13.3 kJ/mol

                     ΔGreac <0  negative

ΔGhydrolize= -30.5 kJ/mol allows to

store ΔGreac =+17.2 kJ/mol free energy

in reaction per one mole of

           peptide bond

la-Gly.jpg

      AlaninoGlycine

             Ala-Gly

                 AG