Learning Strategies in Biochemistry: Lipids and Membranes
Essential Review: General and Organic Chemistry
Review the structure and reactions of esters and phosphates
(actually, phosphate esters), especially hydrolysis of these compounds. Also review
the synthesis of esters from carboxylic acids and alcohols, and the synthesis of
phosphates from phosphoric acid and alcohols.
Essential Memory Work Learn How to Construct Membrane Lipids from their Components
A key to understanding the bewildering array of complex lipid
structures is to start seeing them as simpler substances (fatty acids, glyerol, phosphate,
and alcohols), joined by familiar functional groups (ester and phosphate ester). One way
to develop this insight is to memorize how to put complex lipids together from their
components.
Find a table of fatty-acid structures (for example, Table 9-1 in Lehninger,
Nelson, and Cox, 2nd Ed.) and memorize the structures of palmitate and oleate, examples of
some of the most plentiful saturated and unsaturated fatty acids, respectively. If you
don't already know it, learn the structure of glycerol. Take another hard look at
phosphate ion.
Now look for a table of glycerophospholipids (LN&C, Table 9-7).
Learn how to draw phosphatidic acid, the parent compound of glycerphospholipids,
starting from structural formulas of any two fatty acids, glycerol, and phosphate. Thenook
closely at how the "head-group substituents" (alcohols) listed in the table are
joined to phosphatidic acid to make a glycerophospholipid. CAUTION: Several of these
alcohols (serine, for example) could in principle be joined to phosphatidic in more
than one way, but only one way corresponds to the naturally occurring structure. So look
carefully at the linkages, and draw out some full glycerophospholipid structures. Your
learning goal is to be able to take the structures of the components and correctly link
them into a drawing of a glycerphospholipid (see quiz below).
Now look for a table of sphingolipids (LN&C, Table 9-9). Study it
in the same manner, until you can draw a typical sphingolipid if you are provided with
sphingosine, a fatty acid, phosphate, and an alcohol. Note that the fatty acid in a
sphingolipid links to sphingosine by an amide linkage instead of an ester linkage,
and note also that one of the nonpolar tails of a sphingolipid is part of the spingosine
molecule itself, rather than being derived from a fatty acid.
With this little memory task under your belt, you'll find it much easier to
read about the variety of lipids that make up fats, oils, and membranes.
Quiz for USM Students
(At first class on this topic -- counts as 1/10 of one exam)
I will provide drawings of fatty acids, glycerol, phosphate, a common
"head-group" alcohol, and perhaps sphingosine. I will ask you to assemble them
into a structural formula of a glycerphospholipid or sphingolipid. You don't need to
recall any of the component structures in order to carry out this quiz; you simply need to
know exactly how the components are linked together.
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