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1 Overview of transcription and translation (Section 3-3B).
2 DNA sequence determination by the chain terminator method (Section 3-4C).
3 PCR and site-directed mutagenesis (Section 3-5C).
1 DNA (Fig. 3-9).
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4 Protein sequence determination (Section 5-3).
5 Protein evolution (Section 5-4A).
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6 Stable helices in proteins: The a helix (Section 6-1B).
7 Hydrogen bonding in b sheets (Section 6-1B).
8 Secondary structures in proteins (Section 6-2B).
2 The two-domain protein glyceraldehyde-3-phosphate dehydrogenase (Fig. 6-30).
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3 A mouse antibody (Fig. 7-33).
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4 A model of glycerophospholipid binding phospholipase A2 (Fig. 9-6).
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9 Membrane structure and the fluid mosaic model (Section 10-2A).
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10 Catalytic mechanism of serine proteases (Section 11-5C).
5 Bovine pancreatic RNase S in complex with the dinucleotide phosphonate UpcA (Fig. 11-7).
6 Carbonic anhydrase (Fig. 11-11).
7 Hen egg white lysozyme (Fig. 11-15).

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11 Michaelis–Menten kinetics, Lineweaver–Burk plots, and enzyme inhibition (Section 12-1B).
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8 Adenylate kinase (Fig. 13-8).
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12 Glycolysis overview (Section 14-1).
9 Substrate-induced conformational change in yeast hexokinase (Fig. 14-2).
10 Yeast TIM in complex with its transition state analog 2-phosphoglycolate (Fig. 14-6).
11 Pyruvate decarboxylase in complex with thiamine pyrophosphate (Fig. 14-19).
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13 Control of glycogen metabolism (Section 15-3B).
12 The C subunit of cAMP-dependent protein kinase (Fig. 15-14).
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14 Overview of the citric acid cycle (Section 16-1).
13 Conformational changes in citrate synthase (Fig. 16-8).
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15 Electron transport and oxidative phosphorylation overview (Section 17-2B).
16 The Q Cycle (Section 17-2E).
17 F1F0-ATP synthase and the binding change mechanism (Section 17-3B).
14 Ferredoxin (Fig. 17-9).
15 Cytochrome bc1 (Complex III) from bovine heart mitochondria (Fig. 17-12).
16 Cytochrome c showing the Lys residues involved in intermolecular complex formation (Fig. 17-14).
17 Bovine heart cytochrome c oxidase (Fig. 17-15).
18 F1-ATPase (Fig. 17-20).
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18 Two-center photosynthesis (Z-scheme) overview (Section 18-2C).
19 The light-harvesting complex LH-2 from Rps. molischianum (Fig. 18-5).
20 The photosynthetic reaction center from Rb. sphaeroides (Fig. 18-8).
21 Ferredoxin–NADP+ reductase (Fig. 18-18)
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22 Medium-chain acyl-CoA dehydrogenase in complex with octanoyl-CoA (Fig. 19-10).
23 The N-terminal domain of the catalytically active subunit of methylmalonyl-CoA mutase (Fig. 19-16).
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24 Ubiquitin (Fig. 20-1).
25 The bifunctional enzyme tryptophan synthase (Fig. 20-33).
26 The nitrogenase Fe-protein from Azotobacter vinelandii. (Fig. 20-39).
27 The nitrogenase MoFe-protein from Azotobacter vinelandii. (Fig. 20-40).
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19 Mechanisms of hormone signaling involving the adenylate cyclase system (Section 21-3B).
20 Mechanisms of hormone signaling involving the receptor tyrosine kinase system (Section 21-3C).
28 A heterotrimeric G-protein (Fig. 21-11).
29 Human growth hormone in complex with its receptor (Fig. 21-13).
30 The insulin receptor (Fig. 21-17b).
31 Human leptin-E100 (Fig. 21-23).

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32 Ribonucleotide reductase R2 (Fig. 22-8b).
33 Dihydrofolate reductase in complex with folate (Fig. 22-16).
34 Purine nucleoside phosphorylase (Fig. 22-18).
35 Adenosine deaminase (Fig. 22-19).
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21 DNA structures (Section 23-1A).
22 DNA supercoiling (Section 23-1C).
23 Transcription factor–DNA interactions (Section 23-4B).
24 Nucleosome structure (Section 23-5B).
36 An RNA–DNA hybrid helix (Fig. 23-3).
37 Yeast Type II topoisomerase (Fig. 23-13).
38 Fragment I of E. coli 5S-RNA (Fig. 23-22).
39 A hammerhead ribozyme (Fig. 23-25b).
40 The 434 phage repressor in complex with its target DNA (Fig. 23-32).
41 E. coli trp repressor–operator DNA complex (Fig. 23-33).
42 E. coli met repressor–operator DNA complex (Fig. 23-34).
43 A three–zinc finger segment of Zif268 in complex with its target DNA (Fig. 23-36).
44 Yeast GAL4 DNA-binding domain in complex with its target DNA (Fig. 23-37).
45 A portion of yeast GCN4 in complex with its target DNA (Fig. 23-39).
46 Max protein in complex with its target DNA (Fig. 23-40).
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25 The replication of DNA in E. coli (Section 24-2B).
47 DNA polymerase I Klenow Fragment in complex with duplex DNA (Fig. 24-10).
48 E. coli Tus in complex with a Ter site-containing DNA (Fig. 24-16).
49 PCNA (Fig. 24-17).
50 HIV-1 reverse transcriptase (Box 24-2).
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51 TATA-binding protein (TBP) in complex with TATA box-containing DNA (Fig. 25-13).
52 A portion of the catalytic domain of a self-splicing intron (Fig. 25-24).
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26 The structure of tRNA (Section 26-2A).
27 The structures of aminoacyl–tRNA synthetases (Section 26-2B).
28 Translational initiation (Section 26-4A).
29 Translational elongation (Section 26-4B).
53 Ribosomal elongation factor EF-Tu in its complexes with GDP and GDPNP (Fig. 26-29).
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30 Regulation of gene expression by the lac repressor system (Section 27-2A).
54 The CAP–cAMP dimer in complex with its target DNA (Fig. 27-14).
55 The l repressor N-terminal domain in complex with its target DNA (Fig. 27-25).
56 Cro protein dimer in complex with its target DNA (Fig. 27-26).
57 The glucocorticoid receptor DNA-binding domain in complex with its target DNA (Fig. 27-33).
58 CDK2 phosphorylated at Thr 160 in complex with cyclin A and ATPgS (Fig. 27-35).
59 Human p53 in complex with its target DNA (Fig. 27-36).
60 The Engrailed protein homeodomain in complex with its target DNA (Fig. 27-49).
27-Regulation of Gene Expression 26-Translation 25-Transcription and RNA Processing 24-DNA Replication, Repair, and Recombination 23-Nucleic Acid Structure 22-Nucleotide Metabolism 21-Mammalian Fuel Metabolism 20-Amino Acid Metabolism 19-Lipid Metabolism 18-Photosynthesis 17-Electron Transport and Oxidative Phosphorylation 16-Citric Acid Cycle 15-Glycogen Metabolism and Gluconeogenesis 14-Glucose Catabolism 13-Introduction to Metabolism 12-Enzyme Kinetics, Inhibition, and Regulation 11-Enzymatic Catalysis 10-Biological Membranes 9-Lipds 7-Protein Function 6-Proteins: Three-Dimensional Structure 5-Proteins: Primary Structure 3-Nucleotides and Nucleic Acids