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Summary
Body_ID: HC002039
There are thousands of different proteins in cells, and each protein has a different structure and function. The higher order structure of a protein is the product of its primary, secondary, tertiary, and quaternary structure. Purification and characterization of proteins is essential for elucidating their structure and function. By taking advantage of differences in their size, solubility, charge and ligand binding properties, proteins can be purified to homogeneity using various chromatographic and electrophoretic techniques. The molecular mass and purity of a protein, and its subunit composition, can be determined by SDS-PAGE. The primary structure can be determined by hydrolysis of a protein and automated Edman degradation. Deciphering the primary and three-dimensional structures of a protein by X-ray analysis or nmR spectroscopy leads to an understanding of structure-function relationships in proteins. Mass spectrometry has become a powerful technique for elucidating protein structure, chemical modification, function and homology.
Body_ID: P002065
ACTIVE LEARNING
Body_ID: B002010
  1. Mass spectrometry analysis of blood, urine and tissues is now being applied for clinical diagnosis. Discuss the merits of this technique with respect to specificity, sensitivity, through-put and breadth of analysis, including proteomic analysis for diagnostic purposes.
  2. Study the role of chaperone proteins in the folding and transport of newly synthesized proteins in the cell.
  3. Review the importance of protein misfolding and deposition in tissues in age-related chronic diseases.
Body_ID: PB02014
Further reading
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Collinge J. Prion diseases of humans and animals: their cause of molecular basis. Annu Rev Neurosci 2001;2:519-550. Full articleGo to this article on the publisher's site
Body_ID: R002001
Frydman J. Folding of newly translated proteins in vivo: the chaperones. Annu Rev Biochem 2001;70:603-647. Full articleGo to this article on the publisher's site
Body_ID: R002002
Imai J, Yashiroda H, Maruya M, Yahara I, Tanaka K. Proteasomes and molecular chaperones: cellular machinery responsible for folding and destruction of unfolded proteins. Cell Cycle 2003;2:585-590.
Body_ID: R002003
Petricoin EF, Liotta LA. Clinical applications of proteomics. J Nutr 2003;133:2476S-2484S.
Body_ID: R002004
Valentine JS, Hart PJ. Misfolded CuZnSOD and amyotrophic lateral sclerosis. Proc Natl Acad Sci USA 2003;100:3617-3622.
Body_ID: R002005
Zhu H, Bilgin M, Snyder M. Proteomics. Annu Rev Biochem 2003;72:783-812. Full articleGo to this article on the publisher's site
Body_ID: R002006
Relevant websites
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SWISS-PROT http://www.expasy.ch/sprotOpen this link in a new window Full articleGo to this article on the publisher's site
Body_ID: R002007
Protein Data Bank http://www.rcsb.org/pdbOpen this link in a new window Full articleGo to this article on the publisher's site
Body_ID: R002008
Protein structure: http://kinemage.biochem.duke.edu/Open this link in a new window Full articleGo to this article on the publisher's site
Body_ID: R002009
Body_ID: P0025
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