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RasMol Manual: Frames ReadMe
The files in this folder were last modified on June 16, 1997 by Dr. Will McClure.
Please see the following sections in the Manual for general operating suggestions:
Briefly, the RasMol 2.6 Manual can be displayed in a frames format with an Index frame
at the left or in a single-page format without the Index frame. In both formats navigation
links are found at the top and bottom of each frame (or page).
All of the navigation links between frames (or pages) are plain-vanilla HTML. The addition
of JavaScript control or GIFs as image maps might enhance the overall appearance in
Netscape, but it might also limit the usefulness for those po' folks who can't afford a
high-quality browser!
Switching between formats: Since either can be preferable under different
circumstances, the formats can be converted from one to the other:
These options are also found at the top of the Table of Contents page (or frame).
With the Manual on your computer disk (or server) in the appropriate folder/directory,
click on the Frames or No Frames link above, and set a Bookmark for future access.
Note: The "single file" version of the Manual, rasman.htm,
is not included with this downloaded set of files. Except for the link on the
"proxy" page, all of the links in the Manual require a copy of rasman.htm
in the same folder/directory as this frames version.
Changing these (and other) links is fairly simple, but instructions for doing so are not
provided here. (Comments and some alternative display options are inserted in the HTML
text of this page; these can be read in Netscape using View, then Frame Source
or with any text editor.)
If you want to make other changes in the appearance or content of the Manual for your own
use, the following table may be helpful; it lists all of the files currently in the
Manual. If you find errors, or if you make changes that improve the usefulness of the
Manual, please forward your suggestions to Dr. Eric Martz (emartz@microbio.umass.edu) or to W. McClure.
| File Contents | Filename | Size (Kb) |
|---|---|---|
| Frameset: Index & Text frames | RASMAIN.HTM | 9 |
| Index for frames format | INDEX.HTM | 5 |
| Intro to RasMol v2.5 Manual | INTRO.HTM | 9 |
| HTML Intro & Revision History | FRINTRO.HTM | 9 |
| rasman.htm Proxy | RASPROXY.HTM | 5 |
| Navigation Notes | NAVNOTE.HTM | 9 |
| ReadMe | README.HTM | 14 |
| Quick Reference Card v2.6 | REFCARD.PDF | 23 |
| Table of Contents | TOC.HTM | 18 |
| RasMol Icon on TOC | RASICON.GIF | 9 |
| General Operation Part 1 | GENOP1.HTM | 14 |
| General Operation Part 2 | GENOP2.HTM | 18 |
| RasMol's Menu Selections | MENUBAR.HTM | 18 |
| 8 GIFs for Menus; 5 Kb each | 40 | |
| Command Reference A-C | CRAC.HTM | 18 |
| Command Reference D-H | CRDH.HTM | 9 |
| Command Reference I-P | CRIP.HTM | 14 |
| Command Reference Q-Se | CRQS.HTM | 14 |
| Command Reference Se-St | CRSS.HTM | 14 |
| Command Reference T-Z | CRTZ.HTM | 9 |
| Internal Parameters A-C | IPAC.HTM | 9 |
| Internal Parameters D-M | IPDM.HTM | 14 |
| Internal Parameters P-Z | IPPZ.HTM | 14 |
| Atom Expressions | ATEXP.HTM | 9 |
| Predefined Sets A-B | PSAB.HTM | 14 |
| Predefined Sets C-N | PSCN.HTM | 9 |
| Predefined Sets P-Z | PSPZ.HTM | 9 |
| Table of Amino Acid Classes | PSTABLE.HTM | 23 |
| Colors and Color Schemes | COLORS.HTM | 18 |
| Predefined Colors Table | PRECLRS.HTM | 9 |
| Amino/Shapely Colors Table | SHAPELY.HTM | 9 |
| CPK Colors Table | CPKCLRS.HTM | 9 |
| Files and File Formats | FILEFORM.HTM | 23 |
| Example of a PDB File | 1CRN.HTM | 23 |
| Bibliography from v2.5 Manual | BIBLIOG.HTM | 18 |
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